Object
Abscess / Aspirate, Bronchial Fluid / Nasopharynx / Tracheal Aspirate, Expectorate, Biopsy / Tissue, Fixed Tissue (Paraffin Embedded / Formalin Fixed), Growth Cultures / Transmitted Strains, Growth Culture
Parameter
Francisella tularensis, DNA
Reference standard
Internal method
Internal method identity
20572
Comment
Real-time PCR, in house developed
CFX
Object
Abscess, ascites, biopsy, tissues, breast milk, dialysis, dren liquid, lower respiratory tract (including BRS, EKS, TRS), upper respiratory tract (throat, mouth, naso nose), pleural fluid, spinal fluid, wound, pus, urine, urogenital samples (cervix, vagina , urethra), ear, eye, synovial fluid
Reference standard
Internal method
Internal method identity
14601, 16199, 16638
16639, 45743, 16746
16783, 18022, 18687,
16648, 37549, 43457,
20838
Comment
Culturing, identification and antimicrobial resistance
Parameter
Pathogenic bacteria
Reference standard
Internal method
Internal method identity
14307
15524
15537
16369
14315
40911
Comment
Culturing, identification and antimicrobial resistance
Parameter
Pathogenic bacteria
Reference standard
Internal method
Internal method identity
14307
14315
15524
16369
40911
Comment
Culturing, identification and antimicrobial resistance
Parameter
Panton Valentine Leukocidin (PVL) gen. mecA gen. spa gen
Reference standard
Internal method
Internal method identity
15032
44692
39169
Reference standard
Internal method
Internal method identity
15032
Comment
Typing Staph. Aureus Protein A -gen repeted area
Parameter
GBS capsule and protein typing
Reference standard
Internal method
Internal method identity
16350
16381
16985
Comment
PCR, qualitative
Applied Biosystems 2720
Reference standard
Internal method
Internal method identity
18705
Comment
PCR and sequencing, in house developed
ABI 3500 XL
Reference standard
Internal method
Internal method identity
17561
Comment
Real time PCR, in house developed
CFX
Object
Bacterial strain from faeces
Parameter
E.coli (EHEC)
Shiga-like toksin 1+2
Reference standard
Internal method
Internal method identity
18670
Comment
Multiplex real time PCR, in house
CFX
Object
Bacterial strain from faeces
Parameter
E.coli (EPEC)
intimin-gen, DNA
Reference standard
Internal method
Internal method identity
17886
Comment
Real time PCR, in house
CFX
Object
Bone to/from bone bank
Parameter
Pathogenic bacteria
Reference standard
Internal method
Internal method identity
14307, 14315, 15537,
40911, 15524, 15924,
16369
Comment
Culturing, identification and antimicrobial resistance
Reference standard
Internal method
Internal method identity
14601, 16199, 45743,
16638, 18022, 18687,
16648, 37549, 43457,
20838
Comment
Culturing and manual reading
BactecFX
Object
Bloodcluture aerob & anaerob
Parameter
Pathogenic bacteria
Reference standard
Internal method
Internal method identity
8375
8406
33170
Comment
Culturing and manual reading
BactecFX
Object
Bursa fluid / joint fluid
Parameter
Pathogenic bacteria
Reference standard
Internal method
Internal method identity
14307
14315
15537
15924
Comment
Culturing, identification and antimicrobial resistance
Object
Cervix, vaginal og urine
Parameter
Mycoplasma genitalium
Trichomonas vaginalis
Reference standard
Internal method
Internal method identity
13710, 42405, 43126
Comment
Real time PCR, qualitative, Alinity m (Abbott)
Object
Cervix, vaginal, urine, throat and anus
Parameter
Chlamydia trachomatis
Neisseria gonhoreaea
Reference standard
Internal method
Internal method identity
13710, 42405, 43126
Comment
Real time PCR, qualitative, Alinity m (Abbott)
Parameter
Pathogenic bacteria
Reference standard
Internal method
Internal method identity
7824
Comment
Culturing, identification and antimicrobial resistance
Parameter
Pathogenic bacteria
Reference standard
Internal method
Internal method identity
15524
16369
14315
14307
40911
Comment
Culturing, identification and antimicrobial resistance
Object
Sputum, bronchial wash fluid, throat
Parameter
Legionella pneumophila
Reference standard
Internal method
Internal method identity
16649
Comment
Real time PCR, in house developed
LightCycler 2.0
Object
Sputum, bronchial rinse liquid, nasopharynx
Parameter
Chlamydophila pneumoniae (TWAR)
Reference standard
Internal method
Internal method identity
21472
Comment
Multiplex real time PCR
CFX
Object
Sputum, bronchial wash fluid, tissue, biopsies, abscess
Parameter
Mycobacterium tuberculosis
Reference standard
Internal method
Internal method identity
17885
Comment
Real time PCR, in house developed
CFX
Parameter
Patogenic bacteria, screening: Salmonella, Shigella/EIEC, Campylobacter, Yersinia, Vibrio, C.difficile, EHEC, EPEC, ETEC, EAEC
Reference standard
Internal method
Internal method identity
32895
32907
46582
Comment
Allplex™ GI-bacteria(I) Assay + Allplex™ GI-bacteria(II) Assay
QIAstat Dx Gastrointestinal Panel
Parameter
Pathogenic bacteria:
Salmonella spp
Shigella spp
E.coli
Campylobacter spp
Yersinia spp
Vibrio
Aeromonas
Plesiomonas
Reference standard
Internal method
Internal method identity
14131, 14566, 14723
9230, 18672, 18670,
17886, 15772, 14853
Comment
Culturing, identification and antimicrobial resistance
Parameter
Clostridium difficile toxin B
Reference standard
Internal method
Internal method identity
24255
16051
Comment
Multiplex real time PCR, in house developed
CFX
Reference standard
Internal method
Internal method identity
14601, 16199, 45743
16638, 16639, 18022
16783, 18687, 16746,
16648, 37549, 43457,
20838
Comment
Culturing, identification and antimicrobial resistance
Object
Rrespiratory samples, spinal fluid
Parameter
Mycoplasma pneumoniae
Reference standard
Internal method
Internal method identity
21472
Comment
Multiplex real time PCR
CFX
Object
Stomach/intestinal biopsy, ventricle biopsy
Parameter
Helicobacter pylori
Reference standard
Internal method
Internal method identity
16650
Comment
Multiplex real time PCR, in house developed
CFX
Object
Nasopharynx, throat
Parameter
Bordetella pertussis
Reference standard
Internal method
Internal method identity
21472
Comment
Multiplex real time PCR
CFX
Object
Lower respiratory tract
Parameter
Pneumocystis jiroveci
Reference standard
Internal method
Internal method identity
17798
Comment
Real time PCR, in house developed
CFX
Object
Lower respiratory tract
Parameter
Acid proof rods
Reference standard
Internal method
Internal method identity
9161
12849
12847
17650
Comment
Microscopy after Ziehl -Neelsen or Auramin dying
Object
Lower respiratory tract
Reference standard
Internal method
Internal method identity
9155
18204
9161
Comment
Culture in liquid medium with automatic detection (Bactec MGIT, Becton Dickinson) and culture on Löwenstein-Jensen medium.
Object
Nose, throat, perineum, wounds, axilla, pus and secretions
Reference standard
Internal method
Internal method identity
7109
17524
Comment
Culturing, identification and antimicrobial resistance
Object
Placenta, umbilical cord, membranes
Parameter
Pathogenic bacteria
Reference standard
Internal method
Internal method identity
14307, 14315, 15537,
17378, 15524, 16369,
40911
Comment
Culturing, identification and antimicrobial resistance
Parameter
Pathogenic bacteria
Reference standard
Internal method
Internal method identity
14307
14315
15524
16369
40911
Comment
Culturing, identification and antimicrobial resistance
Object
Pus/wounds, surgical wounds, catheter tips
Parameter
Pathogenic bacteria
Reference standard
Internal method
Internal method identity
14307
14315
15537
Comment
Culturing, identification and antimicrobial resistance
Object
Pure culture of bacteria from human material
Parameter
Resistance determination
Reference standard
Internal method
Internal method identity
7509, 8496
9120, 9186, 16110, 19449,
19898, 18853
Comment
Agardiffusion
EUCAST's
Object
Pure culture of bacteria from human material
Parameter
Resistance determination
Reference standard
Internal method
Internal method identity
8496
32415
32660
32475
Comment
Agardiffusjon and MIC/Phoenix
Parameter
Pathogen bacteria
Reference standard
Internal method
Internal method identity
14307, 14315, 15537
15524, 16369, 40911
Comment
Culturing, identification and antimicrobial resistance
Object
Spinal fluid, bacterial strain
Parameter
Listeria moncytogenes
Reference standard
Internal method
Internal method identity
17300
Comment
Real time PCR, in house developed
CFX
Parameter
Screening of bacteria
Reference standard
Internal method
Internal method identity
42553
Comment
Flowcytometry
Sysmex UF 5000
Parameter
Legionella pneumophila antigen
Reference standard
Internal method
Internal method identity
12786
Comment
Antigen detection
BinaxNow
Parameter
Pathogene bacteria
Reference standard
Internal method
Internal method identity
9435, 14307, 14315
15965
Comment
Culturing, identification and antimicrobial resistance
Object
Urogenital samples
Parameter
Neisseria gonhoreaea
Reference standard
Internal method
Internal method identity
13213
14307
14315
Comment
Culturing, identification and antimicrobial resistance
Object
Urogenital samples, aerob growth
Parameter
Pathogene bacteria
Reference standard
Internal method
Internal method identity
14307
14315
15537
Comment
Culturing, identification and antimicrobial resistance
Parameter
Pathogene bacteria
Reference standard
Internal method
Internal method identity
14307, 14315, 15524
15924, 16369, 18671
40911
Comment
Culturing, identification and antimicrobial resistance
Object
Upper & lower respiratory tract
Parameter
Pathogene bacteria
Reference standard
Internal method
Internal method identity
14307
14315
15537
Comment
Culturing, identification and antimicrobial resistance
Parameter
Pathogene bacteria
Reference standard
Internal method
Internal method identity
14307
14315
15537
Comment
Culturing, identification and antimicrobial resistance